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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842015.1_cds_XP_016508219.1_21265
CDS Infomation

[gene=LOC107825819] [db_xref=GeneID:107825819] [protein=rhomboid-like protein 15 isoform X2] [protein_id=XP_016508219.1] [location=join(2669..2692,3854..4019,4533..4836,5028..5060,5150..5241,5407..5480,6612..6706,6792..6861,8153..8322,8980..9031,9111..9167,9275..9346,9426..9431)] [gbkey=CDS]
Sequence

ATGAGACCGAACATTGTGCCTGAGGCGGGATTGCAGACAAGGATGGGACAGTGGTGGGAA
GGAATTCCTGTACTTACATCTGCAGTGGTGGTTGTTTGTGGGGTAATTTACTTGGTTTGC
CTTTTGGTTGGATATGACTCCTTTGCTGAAGTATGCTTCTGGCCCTCTGCTGTAATTTCT
CGATTTCAAGTTTACAGGATTTTCACCTCAATTCTGTTTCATGGTTCTCTACTGCACGTT
CTGTTTAATATGTTAGCTTTGGTTCCTTTGGGTTCTGAGCTGGAGAGGATTATGGGATCT
GTGCGCCTGTTATACATAATTGCTCTGTTGGCCATTAGCAGTGCCTTATTCCATCTTCTT
ATAGCATTGTTGGTTGCTCATAATCCCTTTCATCCTTCTCCATACTTTATGGACGAATGT
GCTATAGGTTTCTCAGGCATCTTATTTTCAATGATTGTGATTGAGACGAGTCTAAGTGGG
GCTCAAACTAGAAGTGTGTTTGGGCTTTTCAATGTGCCTGCTAAATGGTATGCATTGATA
TTATTGGTAGTGTTTCAGCTTGTTATGAGTAATGTCTCCTTACTTGGACATCTATGTGGT
ATTTTGTCTGGATTTGCATATACATATGGATTGTTCAATGTTTTGATACCGGGGACTTCT
TTCTTCTCGGCTATTGAATCTTCCTCATATCTATCAACTTGCGTGAGGCGACCAAAGTTT
ATTATGAGCACTGGTGGTAATGGTGCAGGATACCTACCCACACATTCAATTCAAACTGTG
ACCTCCAGTGGAGTGCTTTCTGGAAATATTTGGGAGAACCTTTCTTCGTGGATGCCACAG
AGGGAGAGCTCTGCTCAGCCGGTGACAGATGATAGCAGGTTTCCAGGGAGAGGAAGAACT
CTAACTTCTCAAACCTCCACTGGAAATCATGATTCAACGTTACAGGCTAGGCTCCTGAGT
GGTAGCAACAGCCCTGAGCGTATTTCAGCTCCAACAGCACTAGGTGGAGAGCGGAGCTTA
ACTGGAAGACAATCAGCAGTAGATGCTACGGCCGGAGCTACCAGACCGATAGGACAGCAG
GGCTCCATTCCCTCAGATGAAAGTGTTCAGAAGCTTGTTGCAATGGGTTTTGAGAAGACA
CAAGTAGAAGTGGCACTGGCAGCAGCAGAAGGGGACATAAATGTTGCTGTAGAAATTTTA
AGCCAGCAGGGTTAA

Peptide Sequence

PEP ID

XP_016508219.1
PEP Infomation

PREDICTED: rhomboid-like protein 15 isoform X2 [Nicotiana tabacum]
Sequence

MRPNIVPEAGLQTRMGQWWEGIPVLTSAVVVVCGVIYLVCLLVGYDSFAEVCFWPSAVIS
RFQVYRIFTSILFHGSLLHVLFNMLALVPLGSELERIMGSVRLLYIIALLAISSALFHLL
IALLVAHNPFHPSPYFMDECAIGFSGILFSMIVIETSLSGAQTRSVFGLFNVPAKWYALI
LLVVFQLVMSNVSLLGHLCGILSGFAYTYGLFNVLIPGTSFFSAIESSSYLSTCVRRPKF
IMSTGGNGAGYLPTHSIQTVTSSGVLSGNIWENLSSWMPQRESSAQPVTDDSRFPGRGRT
LTSQTSTGNHDSTLQARLLSGSNSPERISAPTALGGERSLTGRQSAVDATAGATRPIGQQ
GSIPSDESVQKLVAMGFEKTQVEVALAAAEGDINVAVEILSQQG

Transcript Sequence

Gene sequence data has not been registered.